https://wallabag.chepec.se/share/5e76e150d26128.44547100

A list based off of the above article, with some more I have learnt of from different sources:

• Stencila: An open source office suite for reproducible research.
• Dat project: A protocol for researcher-centric data sharing.
• JOSS: The Journal of Open Source Software (paper review as Github issues!).
• Open Citations: Open bibliographic and citation data.
• Plaudit: A browser extension that enables verified (via ORCID) endorsements of publications. A way to let other researchers know what you think is good science.
• PubPub: Collaborative writing and publishing.
• ReScience: A journal for replicated computational research.
• FlashPub: Fast micropublications.
• ReimagineReview: A whole database of peer review innovations!
• Dokieli: Decentralized articles and annotations, using linked data.
• Scite.ai: Machine learning for determining research quality.
• Scholarcy: Automatic summarisation of papers.
• BMJ Labs' mega list: Projects in scientific publishing, all of them!
• unpaywall integrations (unpaywall is one of several projects run by OurResearch).

Related: How we know what we know: The Initiative for Open Citations (I4OC) helps unlock millions of connections between scholarly research, The Wikimedia blog.